{"id":16153,"date":"2023-02-03T18:58:14","date_gmt":"2023-02-03T17:58:14","guid":{"rendered":"https:\/\/www.neuro-physiol.med.uni-goettingen.de\/wordpress\/?page_id=16153"},"modified":"2024-09-18T09:59:17","modified_gmt":"2024-09-18T07:59:17","slug":"publications-2023","status":"publish","type":"page","link":"https:\/\/www.neuro-physiol.med.uni-goettingen.de\/wordpress\/publications\/publications-2023\/","title":{"rendered":"Publications\u00a0\u00a02023"},"content":{"rendered":"

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1. Alexander LT, Durairaj J, Kryshtafovych A, Abriata LA, Bayo Y, Bhabha G, C\u00e9cile Breyton, Caulton SG,
\nChen J, Degroux S, Ekiert DC, Erlandsen BS, Freddolino PL, Gilzer D, Greening C, Grimes JM, Grinter R,
\nGurusaran M, Hartmann MD, Hitchman CJ, Keown JR, Kropp A, Kursula P, Lovering AL, Lemaitre B, Lia A,
\nLiu S, Logotheti M, Lu S, Mark\u00fasson S, Miller MD, Minasov G, Niemann HH, Opazo F, Phillips Jr GN,
\nDavies OR, Rommelaere S, Rosas-Lemus M, Roversi P, Satchell K, Smith N, Wilson MA, Wu KL, Xia X,
\nXiao H, Zhang W, Zhou ZH, Fidelis K, Topf M, Moult J, Schwede T.<\/p>\n
Protein target highlights in CASP15: Analysis of
\nmodels by structure providers<\/a><\/p>\n
Proteins. 2023 Jul 26. doi: 10.1002\/prot.26545. Online ahead of print.<\/div>\n<\/div>\n<\/div>\n
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2. Bonin EA, Golmohammadi A, Rehm R, Tetzlaff C, Rizzoli SO.<\/p>\n
High-resolution analysis of bound Ca2+<\/sup> in neurons and synapses<\/a><\/p>\n
Life Science Alliance 7(1):e202302030. doi: 10.26508\/lsa.202302030<\/div>\n<\/div>\n<\/div>\n
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3. Buda K, Cermakova K, Hodges HC, Fornasiero EF, Sukenik S, Holehouse AS.<\/p>\n
Using graphs and charts in scientific figures<\/a><\/p>\n
Trends Biochem Sci. 2023 Nov;48(11):913-916. doi: 10.1016\/j.tibs.2023.08.011<\/div>\n<\/div>\n<\/div>\n
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4. Ciavarella C, Motta I, Vasuri F, Palumbo T, Lisi AP, Costa A, Astolfi A, Valente S, Versura P,
\nFornasiero EF, Mauro R, Gargiulo M, Pasquinelli G.<\/p>\n
The PPAR-\u03b3 Agonist Pioglitazone Modulates Proliferation and Migration
\nin HUVEC, HAOSMC and Human Arteriovenous Fistula-Derived Cells<\/a><\/p>\n
Int J Mol Sci. 2023 Feb 23;24(5):4424. doi: 10.3390\/ijms24054424<\/div>\n<\/div>\n<\/div>\n
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5. de Jong-Bolm D, Sadeghi M, Bogaciu CA, Bao G, Klaehn G, Hoff M, Mittelmeier L, Basmanav FB,
\nOpazo F, No\u00e9 F, Rizzoli SO.<\/p>\n
Protein nanobarcodes enable single-step multiplexed fluorescence imaging<\/a><\/p>\n
PLoS Biol. 2023 Dec 11;21(12):e3002427. doi: 10.1371\/journal.pbio.3002427. Online ahead of print.<\/div>\n<\/div>\n<\/div>\n
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6. Fornasiero EF.<\/p>\n
Generalizing the definition of protein turnover
\nto out-of-equilibrium conditions<\/a><\/p>\n
Bioessays. 2023 Jun;45(6):e2300059. doi: 10.1002\/bies.202300059. Epub 2023 Apr 12<\/div>\n<\/div>\n<\/div>\n
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7. Fornasiero EF, Savas JN.<\/p>\n
Determining and interpreting protein lifetimes
\nin mammalian tissues<\/a><\/p>\n
Trends Biochem Sci. 2023 Feb;48(2):106-118. doi: 10.1016\/j.tibs.2022.08.011. Epub 2022 Sep 23<\/div>\n<\/div>\n<\/div>\n
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8. Georgiev SV, Rizzoli SO.<\/p>\n
The long-loop recycling (LLR) of synaptic components
\nas a question of economics<\/a><\/p>\n
Mol Cell Neurosci. 2023 Sep;126:103862. doi: 10.1016\/j.mcn.2023.103862. Epub 2023 May 24.<\/div>\n<\/div>\n<\/div>\n
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9. Golubiani G, van Agen L, Tsverava L, Solomonia R, M\u00fcller M.<\/p>\n
Mitochondrial Proteome Changes in Rett Syndrome<\/a><\/p>\n
Biology 2023, 12, 956. doi: 10.3390\/biology12070956<\/div>\n<\/div>\n<\/div>\n
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10. Hoffmann C, Rentsch J, Tsunoyama TA, Chhabra A, Aguilar Perez G, Chowdhury R, Trnka F,
\nKorobeinikov AA, Shaib AH, Ganzella M, Giannone G, Rizzoli SO, Kusumi A, Ewers H, Milovanovic D.<\/p>\n
Synapsin condensation controls synaptic vesicle
\nsequestering and dynamics<\/a><\/p>\n
Nat Commun. 2023 Oct 23;14(1):6730. doi: 10.1038\/s41467-023-42372-6<\/div>\n<\/div>\n<\/div>\n
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11. Kilisch M, Gere-Becker M, W\u00fcstefeld L, Bonnas C, Crauel A, Mechmershausen M, Martens H,
\nG\u00f6tzke H, Opazo F, Frey S.<\/p>\n
Simple and Highly Efficient Detection of PSD95 Using a Nanobody
\nand Its Recombinant Heavy-Chain Antibody Derivatives<\/a><\/p>\n
Int J Mol Sci. 2023 Apr 14;24(8):7294. doi: 10.3390\/ijms24087294<\/div>\n<\/div>\n<\/div>\n
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12. Li W, Salovska B, Fornasiero EF, Liu Y.<\/p>\n
Toward a hypothesis-free understanding of how phosphorylation
\ndynamically impacts protein turnover<\/a><\/p>\n
Proteomics. 2023 Feb;23(3-4):e2100387. doi: 10.1002\/pmic.202100387. Epub 2022 Dec 7.<\/div>\n<\/div>\n<\/div>\n
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13. Michanski S, Hennek T, Mukhopadhyay M, Steyer AM, Gonzalez PA, Grewe K, Ilgen P, G\u00fcltas M,
\nFornasiero EF, Jakobs S, M\u00f6bius W, Vogl C, Pangr\u0161i\u010d T, Rizzoli SO, Wichmann C.<\/p>\n
Age-dependent structural reorganization of utricular ribbon synapses<\/a><\/p>\n
Front Cell Dev Biol. 2023 Aug 10:11:1178992. doi: 10.3389\/fcell.2023.1178992. eCollection 2023.<\/div>\n<\/div>\n<\/div>\n
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14. Mironov SL.<\/p>\n
A simple alternative in approximation and asymptotic
\nexpansion by exponential\/trigonometric functions<\/a><\/p>\n
2023 Phys. Scr. 98 095221. doi: 10.1088\/1402-4896\/acec1b<\/div>\n<\/div>\n<\/div>\n
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15. Mironov SL.<\/p>\n
Bound Ca2+<\/sup> moves faster and farther from single open
\nchannels than free Ca2+<\/sup><\/a><\/p>\n
Front. Physiol., 20 Dec. 2023. Volume 14\u20132023. doi: 10.3389\/fphys.2023.1266120<\/div>\n<\/div>\n<\/div>\n
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16. Mougios N, Opazo F, Rizzoli SO, Reshetniak S.<\/p>\n
Trafficking proteins show limited differences in mobility
\nacross different postsynaptic spines<\/a><\/p>\n
ISCIENCE. Volume 26, Issue 2, 17 February 2023. doi: 10.1016\/j.isci.2023.105971<\/div>\n<\/div>\n<\/div>\n
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17. Ortin S, Soriano MC, Tetzlaff C, W\u00f6rg\u00f6tter F, Fischer I, Mirasso CR, Argyris A.<\/p>\n
Implementation of input correlation learning with an
\noptoelectronic dendritic unit<\/a><\/p>\n
Front. Phys., 15 March 2023, Volume 11 – 2023 | https:\/\/doi.org\/10.3389\/fphy.2023.1112295<\/div>\n<\/div>\n<\/div>\n
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18. Pena R, Bluhm SL, Ammerschubert S, Ag\u00fci-Gonzalez P, Rizzoli SO, Scheu S, Polle A.<\/p>\n
Mycorrhizal C\/N ratio determines plant-derived carbon
\nand nitrogen allocation to symbiosis<\/a><\/p>\n
Commun Biol. 2023 Dec 5;6(1):1230. doi: 10.1038\/s42003-023-05591-7<\/div>\n<\/div>\n<\/div>\n
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19. Ricci S, Kappel D, Tetzlaff C, Ielmini D, Covi E.<\/p>\n
Tunable synaptic working memory with volatile memristive devices<\/a><\/p>\n
2023 Neuromorph. Comput. Eng. 3 044004. doi: 10.1088\/2634-4386\/ad01d6<\/div>\n<\/div>\n<\/div>\n
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20. Roeder SS, Bonnin EA, Wu TD, Guerquin-Kern JL, Jabari S, Brandner S, Ey\u00fcpoglu IY, Gollwitzer S,
\nHamer HM, Gerner ST, D\u00f6ppner TR, Rummel C, Englund E, Heimke-Brinck R, Borst T, Daniel C, Amann K, Schl\u00f6tzer-Schrehardt U, Tonchev AB, Roessler K, Schwab S, Bergmann O, Rizzoli SO, Huttner HB.<\/p>\n
Tracking cell turnover in human brain using 15<\/sup>N-thymidine
\nimaging mass spectrometry<\/a><\/p>\n
Front Neurosci. 2023 Oct 5;17:1274607. doi: 10.3389\/fnins.2023.1274607. eCollection 2023<\/div>\n<\/div>\n<\/div>\n
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21. Saal KA, Shaib AH, Mougios N, Crzan D, Opazo F, Rizzoli SO.<\/p>\n
Heat denaturation enables multicolor X10-STED microscopy<\/a><\/p>\n
Sci Rep 13, 5366 (2023). doi: 10.1038\/s41598-023-32524-5<\/div>\n<\/div>\n<\/div>\n
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22. Stejerean-Todoran I, Gimotty PA, Watters A, Brafford P, Krepler C, Godok T, Li H, Bonilla Del Rio Z,
\nZieseniss A, Katschinski DM, Sertel SM, Rizzoli SO, Garman B, Nathanson KL, Xu X, Chen Q, Oswald JH,
\nLotem M, Mills GB, Davies MA, Sch\u00f6n MP, Bogeski I, Herlyn M, Vultur A.<\/p>\n
A distinct pattern of growth and RAC1 signaling in melanoma
\nbrain metastasis cells<\/a><\/p>\n
Neuro Oncol. 2023 Apr 6;25(4):674-686. doi: 10.1093\/neuonc\/noac212<\/div>\n<\/div>\n<\/div>\n
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23. Villa Real KQZ, Mougios N, Rehm R, Sograte-Idrissi S, Albert L, Rahimi AM, Maidorn M,
\nHentze J, Mart\u00ednez-Carranza M, Hosseini H, Saal KA, Oleksiievets N, Prigge M, Tsukanov R,
\nStenmark P, Fornasiero EF, Opazo F.<\/p>\n
A Versatile Synaptotagmin-1 Nanobody Provides Perturbation-Free Live Synaptic Imaging And Low Linkage-Error in Super-Resolution Microscopy<\/a><\/p>\n
Small Methods. 2023 Oct;7(10):e2300218. doi: 10.1002\/smtd.202300218. Epub 2023 Jul 8.<\/div>\n<\/div>\n<\/div>\n
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24. Warth Perez Arias CC, Silbern I, Caldi Gomes L, Wartmann H, Dambeck V, Fanz J, Neuenroth L,
\nB\u00e4hr M, Outeiro TF, Bonn S, Stadelmann-Nessler C, Rizzoli SO, Lenz C, Urlaub H, Lingor P.<\/p>\n
Proteomic analysis of the human hippocampus identifies neuronal pentraxin 1 (NPTX1) as synapto-axonal target in late-stage Parkinson’s disease<\/a><\/p>\n
J Neurochem. 2023 Sep;166(5):862-874. doi: 10.1111\/jnc.15924. Epub 2023 Jul 28.<\/div>\n<\/div>\n<\/div>\n
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        1. Alexander LT, Durairaj J, Kryshtafovych A, Abriata LA, Bayo Y, Bhabha G, C\u00e9cile Breyton, Caulton SG, Chen J, Degroux S, Ekiert DC, Erlandsen BS, Freddolino PL, Gilzer D, Greening C, Grimes JM, Grinter R, Gurusaran M, Hartmann MD, Hitchman CJ, Keown JR, Kropp A, Kursula P, Lovering AL, Lemaitre B, … <\/p>\n

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