1. Alexander LT, Durairaj J, Kryshtafovych A, Abriata LA, Bayo Y, Bhabha G, Cécile Breyton, Caulton SG,
Chen J, Degroux S, Ekiert DC, Erlandsen BS, Freddolino PL, Gilzer D, Greening C, Grimes JM, Grinter R,
Gurusaran M, Hartmann MD, Hitchman CJ, Keown JR, Kropp A, Kursula P, Lovering AL, Lemaitre B, Lia A,
Liu S, Logotheti M, Lu S, Markússon S, Miller MD, Minasov G, Niemann HH, Opazo F, Phillips Jr GN,
Davies OR, Rommelaere S, Rosas-Lemus M, Roversi P, Satchell K, Smith N, Wilson MA, Wu KL, Xia X,
Xiao H, Zhang W, Zhou ZH, Fidelis K, Topf M, Moult J, Schwede T.
Chen J, Degroux S, Ekiert DC, Erlandsen BS, Freddolino PL, Gilzer D, Greening C, Grimes JM, Grinter R,
Gurusaran M, Hartmann MD, Hitchman CJ, Keown JR, Kropp A, Kursula P, Lovering AL, Lemaitre B, Lia A,
Liu S, Logotheti M, Lu S, Markússon S, Miller MD, Minasov G, Niemann HH, Opazo F, Phillips Jr GN,
Davies OR, Rommelaere S, Rosas-Lemus M, Roversi P, Satchell K, Smith N, Wilson MA, Wu KL, Xia X,
Xiao H, Zhang W, Zhou ZH, Fidelis K, Topf M, Moult J, Schwede T.
Protein target highlights in CASP15: Analysis of
models by structure providers
models by structure providers
Proteins. 2023 Jul 26. doi: 10.1002/prot.26545. Online ahead of print.
2. Bonin EA, Golmohammadi A, Rehm R, Tetzlaff C, Rizzoli SO.
High-resolution analysis of bound Ca2+ in neurons and synapses
Life Science Alliance 7(1):e202302030. doi: 10.26508/lsa.202302030
3. Buda K, Cermakova K, Hodges HC, Fornasiero EF, Sukenik S, Holehouse AS.
Using graphs and charts in scientific figures
Trends Biochem Sci. 2023 Nov;48(11):913-916. doi: 10.1016/j.tibs.2023.08.011
4. Ciavarella C, Motta I, Vasuri F, Palumbo T, Lisi AP, Costa A, Astolfi A, Valente S, Versura P,
Fornasiero EF, Mauro R, Gargiulo M, Pasquinelli G.
Fornasiero EF, Mauro R, Gargiulo M, Pasquinelli G.
The PPAR-γ Agonist Pioglitazone Modulates Proliferation and Migration
in HUVEC, HAOSMC and Human Arteriovenous Fistula-Derived Cells
in HUVEC, HAOSMC and Human Arteriovenous Fistula-Derived Cells
Int J Mol Sci. 2023 Feb 23;24(5):4424. doi: 10.3390/ijms24054424
5. de Jong-Bolm D, Sadeghi M, Bogaciu CA, Bao G, Klaehn G, Hoff M, Mittelmeier L, Basmanav FB,
Opazo F, Noé F, Rizzoli SO.
Opazo F, Noé F, Rizzoli SO.
Protein nanobarcodes enable single-step multiplexed fluorescence imaging
PLoS Biol. 2023 Dec 11;21(12):e3002427. doi: 10.1371/journal.pbio.3002427. Online ahead of print.
6. Fornasiero EF.
Generalizing the definition of protein turnover
to out-of-equilibrium conditions
to out-of-equilibrium conditions
Bioessays. 2023 Jun;45(6):e2300059. doi: 10.1002/bies.202300059. Epub 2023 Apr 12
7. Fornasiero EF, Savas JN.
Determining and interpreting protein lifetimes
in mammalian tissues
in mammalian tissues
Trends Biochem Sci. 2023 Feb;48(2):106-118. doi: 10.1016/j.tibs.2022.08.011. Epub 2022 Sep 23
8. Georgiev SV, Rizzoli SO.
The long-loop recycling (LLR) of synaptic components
as a question of economics
as a question of economics
Mol Cell Neurosci. 2023 Sep;126:103862. doi: 10.1016/j.mcn.2023.103862. Epub 2023 May 24.
9. Golubiani G, van Agen L, Tsverava L, Solomonia R, Müller M.
Mitochondrial Proteome Changes in Rett Syndrome
Biology 2023, 12, 956. doi: 10.3390/biology12070956
10. Hoffmann C, Rentsch J, Tsunoyama TA, Chhabra A, Aguilar Perez G, Chowdhury R, Trnka F,
Korobeinikov AA, Shaib AH, Ganzella M, Giannone G, Rizzoli SO, Kusumi A, Ewers H, Milovanovic D.
Korobeinikov AA, Shaib AH, Ganzella M, Giannone G, Rizzoli SO, Kusumi A, Ewers H, Milovanovic D.
Synapsin condensation controls synaptic vesicle
sequestering and dynamics
sequestering and dynamics
Nat Commun. 2023 Oct 23;14(1):6730. doi: 10.1038/s41467-023-42372-6
11. Kilisch M, Gere-Becker M, Wüstefeld L, Bonnas C, Crauel A, Mechmershausen M, Martens H,
Götzke H, Opazo F, Frey S.
Götzke H, Opazo F, Frey S.
Simple and Highly Efficient Detection of PSD95 Using a Nanobody
and Its Recombinant Heavy-Chain Antibody Derivatives
and Its Recombinant Heavy-Chain Antibody Derivatives
Int J Mol Sci. 2023 Apr 14;24(8):7294. doi: 10.3390/ijms24087294
12. Li W, Salovska B, Fornasiero EF, Liu Y.
Toward a hypothesis-free understanding of how phosphorylation
dynamically impacts protein turnover
dynamically impacts protein turnover
Proteomics. 2023 Feb;23(3-4):e2100387. doi: 10.1002/pmic.202100387. Epub 2022 Dec 7.
13. Michanski S, Hennek T, Mukhopadhyay M, Steyer AM, Gonzalez PA, Grewe K, Ilgen P, Gültas M,
Fornasiero EF, Jakobs S, Möbius W, Vogl C, Pangršič T, Rizzoli SO, Wichmann C.
Fornasiero EF, Jakobs S, Möbius W, Vogl C, Pangršič T, Rizzoli SO, Wichmann C.
Age-dependent structural reorganization of utricular ribbon synapses
Front Cell Dev Biol. 2023 Aug 10:11:1178992. doi: 10.3389/fcell.2023.1178992. eCollection 2023.
14. Mironov SL.
A simple alternative in approximation and asymptotic
expansion by exponential/trigonometric functions
expansion by exponential/trigonometric functions
2023 Phys. Scr. 98 095221. doi: 10.1088/1402-4896/acec1b
15. Mironov SL.
Bound Ca2+ moves faster and farther from single open
channels than free Ca2+
channels than free Ca2+
Front. Physiol., 20 Dec. 2023. Volume 14–2023. doi: 10.3389/fphys.2023.1266120
16. Mougios N, Opazo F, Rizzoli SO, Reshetniak S.
Trafficking proteins show limited differences in mobility
across different postsynaptic spines
across different postsynaptic spines
ISCIENCE. Volume 26, Issue 2, 17 February 2023. doi: 10.1016/j.isci.2023.105971
17. Ortin S, Soriano MC, Tetzlaff C, Wörgötter F, Fischer I, Mirasso CR, Argyris A.
Implementation of input correlation learning with an
optoelectronic dendritic unit
optoelectronic dendritic unit
Front. Phys., 15 March 2023, Volume 11 – 2023 | https://doi.org/10.3389/fphy.2023.1112295
18. Pena R, Bluhm SL, Ammerschubert S, Agüi-Gonzalez P, Rizzoli SO, Scheu S, Polle A.
Mycorrhizal C/N ratio determines plant-derived carbon
and nitrogen allocation to symbiosis
and nitrogen allocation to symbiosis
Commun Biol. 2023 Dec 5;6(1):1230. doi: 10.1038/s42003-023-05591-7
19. Ricci S, Kappel D, Tetzlaff C, Ielmini D, Covi E.
Tunable synaptic working memory with volatile memristive devices
2023 Neuromorph. Comput. Eng. 3 044004. doi: 10.1088/2634-4386/ad01d6
20. Roeder SS, Bonnin EA, Wu TD, Guerquin-Kern JL, Jabari S, Brandner S, Eyüpoglu IY, Gollwitzer S,
Hamer HM, Gerner ST, Döppner TR, Rummel C, Englund E, Heimke-Brinck R, Borst T, Daniel C, Amann K, Schlötzer-Schrehardt U, Tonchev AB, Roessler K, Schwab S, Bergmann O, Rizzoli SO, Huttner HB.
Hamer HM, Gerner ST, Döppner TR, Rummel C, Englund E, Heimke-Brinck R, Borst T, Daniel C, Amann K, Schlötzer-Schrehardt U, Tonchev AB, Roessler K, Schwab S, Bergmann O, Rizzoli SO, Huttner HB.
Tracking cell turnover in human brain using 15N-thymidine
imaging mass spectrometry
imaging mass spectrometry
Front Neurosci. 2023 Oct 5;17:1274607. doi: 10.3389/fnins.2023.1274607. eCollection 2023
21. Saal KA, Shaib AH, Mougios N, Crzan D, Opazo F, Rizzoli SO.
Heat denaturation enables multicolor X10-STED microscopy
Sci Rep 13, 5366 (2023). doi: 10.1038/s41598-023-32524-5
22. Stejerean-Todoran I, Gimotty PA, Watters A, Brafford P, Krepler C, Godok T, Li H, Bonilla Del Rio Z,
Zieseniss A, Katschinski DM, Sertel SM, Rizzoli SO, Garman B, Nathanson KL, Xu X, Chen Q, Oswald JH,
Lotem M, Mills GB, Davies MA, Schön MP, Bogeski I, Herlyn M, Vultur A.
Zieseniss A, Katschinski DM, Sertel SM, Rizzoli SO, Garman B, Nathanson KL, Xu X, Chen Q, Oswald JH,
Lotem M, Mills GB, Davies MA, Schön MP, Bogeski I, Herlyn M, Vultur A.
A distinct pattern of growth and RAC1 signaling in melanoma
brain metastasis cells
brain metastasis cells
Neuro Oncol. 2023 Apr 6;25(4):674-686. doi: 10.1093/neuonc/noac212
23. Villa Real KQZ, Mougios N, Rehm R, Sograte-Idrissi S, Albert L, Rahimi AM, Maidorn M,
Hentze J, Martínez-Carranza M, Hosseini H, Saal KA, Oleksiievets N, Prigge M, Tsukanov R,
Stenmark P, Fornasiero EF, Opazo F.
Hentze J, Martínez-Carranza M, Hosseini H, Saal KA, Oleksiievets N, Prigge M, Tsukanov R,
Stenmark P, Fornasiero EF, Opazo F.
A Versatile Synaptotagmin-1 Nanobody Provides Perturbation-Free Live Synaptic Imaging And Low Linkage-Error in Super-Resolution Microscopy
Small Methods. 2023 Oct;7(10):e2300218. doi: 10.1002/smtd.202300218. Epub 2023 Jul 8.
24. Warth Perez Arias CC, Silbern I, Caldi Gomes L, Wartmann H, Dambeck V, Fanz J, Neuenroth L,
Bähr M, Outeiro TF, Bonn S, Stadelmann-Nessler C, Rizzoli SO, Lenz C, Urlaub H, Lingor P.
Bähr M, Outeiro TF, Bonn S, Stadelmann-Nessler C, Rizzoli SO, Lenz C, Urlaub H, Lingor P.
Proteomic analysis of the human hippocampus identifies neuronal pentraxin 1 (NPTX1) as synapto-axonal target in late-stage Parkinson’s disease
J Neurochem. 2023 Sep;166(5):862-874. doi: 10.1111/jnc.15924. Epub 2023 Jul 28.