Publications  2025


 
 
 
 

1. Ainatzi S, Kaufmann SV, Silbern I, Georgiev SV, Lorenz S, Rizzoli SO, Urlaub H.

Ca2+--triggered (de)ubiquitination events in synapses

Mol Cell Proteomics. 2025 Mar 13:100946. doi: 10.1016/j.mcpro.2025.100946. Online ahead of print.

 
 
 

2. Bergmann C, Mousaei K, Rizzoli SO, Tchumatchenko T.

How energy determines spatial localisation
and copy number of molecules in neurons

Nat Commun. 2025 Feb 7;16(1):1424. doi: 10.1038/s41467-025-56640-0.

 
 
 

3. Chowdhury R, Mimoso T, Chouaib AA, Mougios N, Krah D, Opazo F, Köster S, Rizzoli SO, Shaib AH.

Microtubules as a versatile reference standard for expansion microscopy

Commun Biol. 2025 Mar 26;8(1):499. doi: 10.1038/s42003-025-07967-3.

 
 
 

4. Dannenberg S, Reshetniak S, Mohammadinejad S, Rizzoli SO, Klumpp, S.

Geometry effects on protein mobility in a synapse

Biophys J. 2025 Aug 8:S0006-3495(25)00500-4. doi: 10.1016/j.bpj.2025.08.007. Online ahead of print.

 
 
 

5. Fries LM, Montrazi ET, Allouche-Arnon H, Opazo F, Bar-Shir A, Frydman L, Glöggler S.

Deuterated Nanopolymers for Renal and Lymphatic Imaging
via Quantitative Deuterium MRI

Nano Lett. 2025 Feb 5;25(5):1758-1764. doi: 10.1021/acs.nanolett.4c03036. Epub 2025 Jan 22.

 
 
 

6. Gallimore AR, Hepburn I, Georgiev SV, Rizzoli SO, De Schutter E.

Dynamic regulation of vesicle pools in a detailed spatial model
of the complete synaptic vesicle cycle

Sci Adv. 2025 May 30;11(22):eadq6477. doi: 10.1126/sciadv.adq6477. Epub 2025 May 28.

 
 
 

7. Georgiev SV, Rizzoli SO.


 
 
 

8. Kowald M, Bachollet, Benseler F, Steinecker M, Boll M, Kaushik, Soykan T, Sun S, Birke R, Ilic D, Brose N, Hörnberg H, Lehmann M, Rizzoli SO, Broichhagen J, Lipstein N.

Endogenous SNAP-Tagging of Munc13‑1 for
Monitoring Synapse Nanoarchitecture

JACS Au. 2025 May 23;5(6):2475-2490. doi: 10.1021/jacsau.4c00946. eCollection 2025 Jun 23.

 
 
 

9. Kumar NH, Kluever V, Kaufmann SV, Bergmann C, Mousaei K, Tomas M, Marrero MC, Chopra A,
Hirose M, Pallas M, Sanfeliu C, Ibrahim SM, Fischer A, Outeiro TF, Urlaub H, Tchumatchenko T,
Lopez Otin C, Fornasiero EF.


 
 
 

10. Markusson S, Raasakka A, Schröder M, Sograte-Idrissi S, Mohammad Rahimi A, Asadpour O, Körner H,
Lodygin D, Eichel-Vogel MA, Chowdhury R, Sutinen A, Muruganandam G, Iyer M, Cooper MH, Weigel MK,
Ambiel N, Werner HB, Zuchero JB, Opazo F, Kursula P.

Nanobodies against the myelin enzyme CNPase as tools
for structural and functional studies

J Neurochem. 2025 Jan;169(1):e16274. doi: 10.1111/jnc.16274.

 
 
 

11. Mikulasch FA, Georgiev SV, Rudelt L, Rizzoli SO, Priesemann V.

Power-law adaptation in the presynaptic vesicle cycle

Commun Biol. 2025 Apr 2;8(1):542. doi: 10.1038/s42003-025-07956-6.

 
 
 

12. Muth S, Moschref F, Freckmann L, Mutschall S, Hojas-Garcia-Plaza I, Bahr JN, Petrovic A, Do TT, Schwarze V, Archit A, Weyand K, Michanski S, Maus L, Imig C, Hintze A, Brose N, Wichmann C, Fernandez-Busnadiego R, Moser T, Rizzoli SO, Cooper BH, Pape C.

SynapseNet: Deep Learning for Automatic Synapse Reconstruction

Mol Biol Cell. 2025 Aug 28:mbcE24110519. doi: 10.1091/mbc.E24-11-0519. Online ahead of print.

 
 
 

13. Santos PI, García-Plaza IH, Shaib A, Rhee JS, Chouaib AA, Brose N, Rizzoli SO, Daniel J, Outeiro TF.

Glutamatergic synaptic resilience to overexpressed human alpha-synuclein

NPJ Parkinsons Dis. 2025 Aug 12;11(1):238. doi: 10.1038/s41531-025-01085-x.

 
 
 

14. Shaib AH, Chouaib AA, Chowdhury R, Altendorf J, Mihaylov D, Zhang C, Krah D, Imani V, Spencer RKW, Georgiev SV, Mougios N, Monga M, Reshetniak S, Mimoso T, Chen H, Fatehbasharzad P, Crzan D, Saal KA, Alawieh MM, Alawar N, Eilts J, Kang J, Soleimani A, Müller M, Pape C, Alvarez L, Trenkwalder C, Mollenhauer B, Outeiro TF, Köster S, Preobraschenski J, Becherer U, Moser T, Boyden ES, Aricescu AR, Sauer M, Opazo F, Rizzoli SO

One-step nanoscale expansion microscopy reveals individual protein shapes

Nat Biotechnol. 2025 Sep;43(9):1539-1547. doi: 10.1038/s41587-024-02431-9. Epub 2024 Oct 9.

 
 
 

15. Unterauer EM, Schentarra EM, Jevdokimenko K, Boushehri SS, Marr C, Opazo F, Fornasiero EF, Jungmann R.

Protocol for SUM-PAINT spatial proteomic imaging generating neuronal architecture maps in rat hippocampal neurons

STAR Protoc. 2025 Mar 5;6(1):103637. doi: 10.1016/j.xpro.2025.103637. Online ahead of print.

 
 
 

16. Woeste H, van Agen L, Müller M.

Mapping of neuronal redox conditions in a mouse model of Rett syndrome

NeuroImage: Reports. 2025 Dec; doi: 10.1016/j.ynirp.2025.100297