
1. Ainatzi S, Kaufmann SV, Silbern I, Georgiev SV, Lorenz S, Rizzoli SO, Urlaub H.
Ca2+--triggered (de)ubiquitination events in synapses
Mol Cell Proteomics. 2025 Mar 13:100946. doi: 10.1016/j.mcpro.2025.100946. Online ahead of print.
2. Bergmann C, Mousaei K, Rizzoli SO, Tchumatchenko T.
How energy determines spatial localisation
and copy number of molecules in neurons
and copy number of molecules in neurons
Nat Commun. 2025 Feb 7;16(1):1424. doi: 10.1038/s41467-025-56640-0.
3. Chowdhury R, Mimoso T, Chouaib AA, Mougios N, Krah D, Opazo F, Köster S, Rizzoli SO, Shaib AH.
Microtubules as a versatile reference standard for expansion microscopy
Commun Biol. 2025 Mar 26;8(1):499. doi: 10.1038/s42003-025-07967-3.
4. Dannenberg S, Reshetniak S, Mohammadinejad S, Rizzoli SO, Klumpp, S.
Geometry effects on protein mobility in a synapse
Biophys J. 2025 Aug 8:S0006-3495(25)00500-4. doi: 10.1016/j.bpj.2025.08.007. Online ahead of print.
5. Fries LM, Montrazi ET, Allouche-Arnon H, Opazo F, Bar-Shir A, Frydman L, Glöggler S.
Deuterated Nanopolymers for Renal and Lymphatic Imaging
via Quantitative Deuterium MRI
via Quantitative Deuterium MRI
Nano Lett. 2025 Feb 5;25(5):1758-1764. doi: 10.1021/acs.nanolett.4c03036. Epub 2025 Jan 22.
6. Gallimore AR, Hepburn I, Georgiev SV, Rizzoli SO, De Schutter E.
Dynamic regulation of vesicle pools in a detailed spatial model
of the complete synaptic vesicle cycle
of the complete synaptic vesicle cycle
Sci Adv. 2025 May 30;11(22):eadq6477. doi: 10.1126/sciadv.adq6477. Epub 2025 May 28.
7. Georgiev SV, Rizzoli SO.
PHluorin-conjugated secondary nanobodies as a tool for
measuring synaptic vesicle exocytosis and endocytosis
measuring synaptic vesicle exocytosis and endocytosis
Sci Rep. 2025 Mar 24;15(1):10093. doi: 10.1038/s41598-025-92703-4.
8. Kowald M, Bachollet, Benseler F, Steinecker M, Boll M, Kaushik, Soykan T, Sun S, Birke R, Ilic D, Brose N, Hörnberg H, Lehmann M, Rizzoli SO, Broichhagen J, Lipstein N.
Endogenous SNAP-Tagging of Munc13‑1 for
Monitoring Synapse Nanoarchitecture
Monitoring Synapse Nanoarchitecture
JACS Au. 2025 May 23;5(6):2475-2490. doi: 10.1021/jacsau.4c00946. eCollection 2025 Jun 23.
9. Kumar NH, Kluever V, Kaufmann SV, Bergmann C, Mousaei K, Tomas M, Marrero MC, Chopra A,
Hirose M, Pallas M, Sanfeliu C, Ibrahim SM, Fischer A, Outeiro TF, Urlaub H, Tchumatchenko T,
Lopez Otin C, Fornasiero EF.
Hirose M, Pallas M, Sanfeliu C, Ibrahim SM, Fischer A, Outeiro TF, Urlaub H, Tchumatchenko T,
Lopez Otin C, Fornasiero EF.
Proteo-transcriptomic reprogramming and resource reallocation
define the aging mammalian brain
define the aging mammalian brain
bioRxiv 2025.08.14.669896. doi: 10.1101/2025.08.14.669896.
10. Markusson S, Raasakka A, Schröder M, Sograte-Idrissi S, Mohammad Rahimi A, Asadpour O, Körner H,
Lodygin D, Eichel-Vogel MA, Chowdhury R, Sutinen A, Muruganandam G, Iyer M, Cooper MH, Weigel MK,
Ambiel N, Werner HB, Zuchero JB, Opazo F, Kursula P.
Lodygin D, Eichel-Vogel MA, Chowdhury R, Sutinen A, Muruganandam G, Iyer M, Cooper MH, Weigel MK,
Ambiel N, Werner HB, Zuchero JB, Opazo F, Kursula P.
Nanobodies against the myelin enzyme CNPase as tools
for structural and functional studies
for structural and functional studies
J Neurochem. 2025 Jan;169(1):e16274. doi: 10.1111/jnc.16274.
11. Mikulasch FA, Georgiev SV, Rudelt L, Rizzoli SO, Priesemann V.
Power-law adaptation in the presynaptic vesicle cycle
Commun Biol. 2025 Apr 2;8(1):542. doi: 10.1038/s42003-025-07956-6.
12. Muth S, Moschref F, Freckmann L, Mutschall S, Hojas-Garcia-Plaza I, Bahr JN, Petrovic A, Do TT, Schwarze V, Archit A, Weyand K, Michanski S, Maus L, Imig C, Hintze A, Brose N, Wichmann C, Fernandez-Busnadiego R, Moser T, Rizzoli SO, Cooper BH, Pape C.
SynapseNet: Deep Learning for Automatic Synapse Reconstruction
Mol Biol Cell. 2025 Aug 28:mbcE24110519. doi: 10.1091/mbc.E24-11-0519. Online ahead of print.
13. Santos PI, García-Plaza IH, Shaib A, Rhee JS, Chouaib AA, Brose N, Rizzoli SO, Daniel J, Outeiro TF.
Glutamatergic synaptic resilience to overexpressed human alpha-synuclein
NPJ Parkinsons Dis. 2025 Aug 12;11(1):238. doi: 10.1038/s41531-025-01085-x.
14. Shaib AH, Chouaib AA, Chowdhury R, Altendorf J, Mihaylov D, Zhang C, Krah D, Imani V, Spencer RKW, Georgiev SV, Mougios N, Monga M, Reshetniak S, Mimoso T, Chen H, Fatehbasharzad P, Crzan D, Saal KA, Alawieh MM, Alawar N, Eilts J, Kang J, Soleimani A, Müller M, Pape C, Alvarez L, Trenkwalder C, Mollenhauer B, Outeiro TF, Köster S, Preobraschenski J, Becherer U, Moser T, Boyden ES, Aricescu AR, Sauer M, Opazo F, Rizzoli SO
One-step nanoscale expansion microscopy reveals individual protein shapes
Nat Biotechnol. 2025 Sep;43(9):1539-1547. doi: 10.1038/s41587-024-02431-9. Epub 2024 Oct 9.
15. Unterauer EM, Schentarra EM, Jevdokimenko K, Boushehri SS, Marr C, Opazo F, Fornasiero EF, Jungmann R.
Protocol for SUM-PAINT spatial proteomic imaging generating neuronal architecture maps in rat hippocampal neurons
STAR Protoc. 2025 Mar 5;6(1):103637. doi: 10.1016/j.xpro.2025.103637. Online ahead of print.
16. Woeste H, van Agen L, Müller M.
Mapping of neuronal redox conditions in a mouse model of Rett syndrome
NeuroImage: Reports. 2025 Dec; doi: 10.1016/j.ynirp.2025.100297
